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FASTER is a fully automated, unsupervised method for processing of high density EEG data.
XDF is a general-purpose container format for multi-channel time series data with extensive associated meta information. XDF is tailored towards biosignal data such as EEG, EMG, EOG, ECG, GSR, MEG, but it can also handle data with high sampling rate (like audio) or data with a high number of channels (like fMRI or raw video). Meta information is stored as XML.
This package provides a C++ library for multi-modal time-synched data transmission over the local network.
MNE-BIDS is a Python package that allows you to read and write BIDS-compatible datasets with the help of MNE-Python.
Elephant (Electrophysiology Analysis Toolkit) is an open-source, community centered library for the analysis of electrophysiological data in the Python programming language. The focus of Elephant is on generic analysis functions for spike train data and time series recordings from electrodes, such as the local field potentials (LFP) or intracellular voltages. In addition to providing a common platform for analysis code from different laboratories, the Elephant project aims to provide a consistent and homogeneous analysis framework that is built on a modular foundation. Elephant is the direct successor to Neurotools and maintains ties to complementary projects such as OpenElectrophy and spykeviewer.
bycycle is a tool for quantifying features of neural oscillations in the time domain, as opposed to the frequency domain, using a cycle-by-cycle approach.
Picard provides Python/Octave/MATLAB code for the preconditionned ICA for real data.
This is a library to perform shift-invariant sparse dictionary learning, also known as convolutional sparse coding (CSC), on time-series data.
mne-icalabel is a Python package for labeling independent components that stem from an Independent Component Analysis (ICA).
MNE-LSL (Documentation website) provides a real-time brain signal streaming framework. MNE-LSL contains an improved python-binding for the Lab Streaming Layer C++ library, mne_lsl.lsl, replacing pylsl. This low-level binding is used in high-level objects to interact with LSL streams.
Python library for reading, writing, and validating SNIRF files
This package contains code to compute the standard EEG electrode locations on a spherical head model for the 10-20, 10-10, and 10-05 system.
pyABF is a Python package for reading electrophysiology data from ABF files. It was created with the goal of providing a Pythonic API to access the content of ABF files which is so intuitive to use (with a predictive IDE) that documentation is largely unnecessary.
MNELAB is a GUI for MNE-Python, a Python package for EEG/MEG analysis.
This package provides a cross-platform interactive viewer to inspect the final results and quality of any spike sorter supported by spikeinterface.
This is an open-source tool which allows to load CURRY data into Python. It supports: raw float (.cdt), ascii (.cdt), legacy raw float (.dat) and legacy ascii (.dat).
klusta is an open source package for automatic spike sorting of multielectrode neurophysiological recordings made with probes containing up to a few dozens of sites.
Fast, efficient, and physiologically-informed tool to parameterize neural power spectra
MNE-Python is an open-source Python package for exploring, visualizing, and analyzing human neurophysiological data such as MEG, EEG, sEEG, ECoG, and more. It includes modules for data input/output, preprocessing, visualization, source estimation, time-frequency analysis, connectivity analysis, machine learning, statistics, and more.
deviceXlib is a library that wraps device-oriented routines and utilities, such as device data allocation, host-device data transfers. It supports CUDA language, together with OpenACC and OpenMP programming paradigms. It wraps a subset of functions from Nvidia cuBLAS, Intel oneMKL BLAS and AMD rocBLAS libraries.
Fortran Package Manager (fpm) is a package manager and build system for Fortran. Its key goal is to improve the user experience of Fortran programmers. It does so by making it easier to build your Fortran program or library, run the executables, tests, and examples, and distribute it as a dependency to other Fortran projects. Fpm's user interface is modeled after Rust's Cargo, so if you're familiar with that tool, you will feel at home with fpm. Fpm's long term vision is to nurture and grow the ecosystem of modern Fortran applications and libraries.
deviceXlib is a library that wraps device-oriented routines and utilities, such as device data allocation, host-device data transfers. It supports CUDA language, together with OpenACC and OpenMP programming paradigms. It wraps a subset of functions from Nvidia cuBLAS, Intel oneMKL BLAS and AMD rocBLAS libraries.
Fypp is a Python powered preprocessor. It can be used for any programming languages but its primary aim is to offer a Fortran preprocessor, which helps to extend Fortran with condititional compiling and template metaprogramming capabilities. Instead of introducing its own expression syntax, it uses Python expressions in its preprocessor directives, offering the consistency and versatility of Python when formulating metaprogramming tasks.
This package provides a geospatial extension for xarray powered by rasterio.