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The lattice package provides a powerful and elegant high-level data visualization system inspired by Trellis graphics, with an emphasis on multivariate data. Lattice is sufficient for typical graphics needs, and is also flexible enough to handle most nonstandard requirements.
This package enables the use of emoji and the Font Awesome glyphs in both base and ggplot2 graphics.
Create interactive ggplot2 graphics using htmlwidgets.
This package implements methods that are useful in designing research studies and analyzing data, with particular emphasis on methods that are developed for or used within the behavioral, educational, and social sciences (broadly defined). That being said, many of the methods implemented within MBESS are applicable to a wide variety of disciplines. MBESS has a suite of functions for a variety of related topics, such as effect sizes, confidence intervals for effect sizes (including standardized effect sizes and noncentral effect sizes), sample size planning (from the accuracy in parameter estimation (AIPE), power analytic, equivalence, and minimum-risk point estimation perspectives), mediation analysis, various properties of distributions, and a variety of utility functions.
This package enables conversions between R objects and JavaScript Object Notation (JSON) using the rapidjsonr library.
This package serves two purposes:
Provide a comfortable R interface to query the Google server for static maps, and
Use the map as a background image to overlay plots within R. This requires proper coordinate scaling.
The extrafont package makes it easier to use fonts other than the basic PostScript fonts that R uses. Fonts that are imported into extrafont can be used with PDF or PostScript output files. There are two hurdles for using fonts in PDF (or Postscript) output files:
Making R aware of the font and the dimensions of the characters.
Embedding the fonts in the PDF file so that the PDF can be displayed properly on a device that doesn't have the font. This is usually needed if you want to print the PDF file or share it with others.
The extrafont package makes both of these things easier.
The Munsell package contains functions for exploring and using the Munsell colour system.
This package provides functions and datasets from book Companion to Applied regression, Second Edition, Sage, 2011.
This package implements tools for manipulation of digital images and the Propagation Separation approach by Polzehl and Spokoiny (2006) <DOI:10.1007/s00440-005-0464-1> for smoothing digital images, see Polzehl and Tabelow (2007) <DOI:10.18637/jss.v019.i01>.
This package creates lots of colorful plots in a multitude of variations. Try a demo of the LSD by running demotour().
This package contains functionality for performing the following methods of p-value aggregation: Fisher's method, the Lancaster method (weighted Fisher's method), and Sidak correction.
This package provides an implementation of the framework of reversed graph embedding (RGE) which projects data into a reduced dimensional space while constructs a principal tree which passes through the middle of the data simultaneously. DDRTree shows superiority to alternatives (Wishbone, DPT) for inferring the ordering as well as the intrinsic structure of single cell genomics data. In general, it could be used to reconstruct the temporal progression as well as the bifurcation structure of any data type.
There are three main goals to the vctrs package:
To propose
vec_size()andvec_type()as alternatives tolength()andclass(). These definitions are paired with a framework for type-coercion and size-recycling.To define type- and size-stability as desirable function properties, use them to analyse existing base function, and to propose better alternatives. This work has been particularly motivated by thinking about the ideal properties of
c(),ifelse(), andrbind().To provide a new
vctrbase class that makes it easy to create new S3 vectors.vctrsprovides methods for many base generics in terms of a few newvctrsgenerics, making implementation considerably simpler and more robust.
This package contains a collection of functions to deal with nonparametric measurement error problems using deconvolution kernel methods. We focus two measurement error models in the package: (1) an additive measurement error model, where the goal is to estimate the density or distribution function from contaminated data; (2) nonparametric regression model with errors-in-variables. The R functions allow the measurement errors to be either homoscedastic or heteroscedastic. To make the deconvolution estimators computationally more efficient in R, we adapt the "Fast Fourier Transform" (FFT) algorithm for density estimation with error-free data to the deconvolution kernel estimation. Several methods for the selection of the data-driven smoothing parameter are also provided in the package. See details in: Wang, X.F. and Wang, B. (2011). Deconvolution estimation in measurement error models: The R package decon. Journal of Statistical Software, 39(10), 1-24.
This package lets you generate random or human readable and pronounceable identifiers.
This package contains the data set for the crowd-sourced benchmarks from running the benchmarkme package.
This package provides functions to fit kernel density functions to animal activity time data; plot activity distributions; quantify overall levels of activity; statistically compare activity metrics through bootstrapping; and evaluate variation in linear variables with time (or other circular variables).
Functions and examples are provided for transmission/disequilibrium tests for extended marker haplotypes, as in Clayton, D. and Jones, H. (1999) "Transmission/disequilibrium tests for extended marker haplotypes".
This package provides tools for regression subset selection, including exhaustive search.
This package provides efficient routines for manipulation of date-time objects while accounting for time-zones and daylight saving times. The package includes utilities for updating of date-time components (year, month, day etc.), modification of time-zones, rounding of date-times, period addition and subtraction etc. Parts of the CCTZ source code, released under the Apache 2.0 License, are included in this package.
This package provides tools to accurately benchmark and analyze execution times for R expressions.
This package can compute multivariate normal and t-probabilities, quantiles, random deviates and densities.
This package implements S4 classes and various tools for financial time series. Basic functions such as scaling and sorting, subsetting, mathematical operations and statistical functions are provided.