This package implements the R version of the log4j package. It offers hierarchic loggers, multiple handlers per logger, level based filtering, space handling in messages and custom formatting.

The ggplot2 package is an excellent and flexible package for elegant data visualization in R. However the default generated plots require some formatting before we can send them for publication. The ggpubr package provides some easy-to-use functions for creating and customizing ggplot2-based publication-ready plots.

This package constructs basis functions of B-splines, M-splines, I-splines, convex splines (C-splines), periodic splines, natural cubic splines, generalized Bernstein polynomials, their derivatives, and integrals (except C-splines) by closed-form recursive formulas. It also contains a C++ head-only library integrated with Rcpp.

This package makes the qhull library available in R, in a similar manner as in Octave. Qhull computes convex hulls, Delaunay triangulations, halfspace intersections about a point, Voronoi diagrams, furthest-site Delaunay triangulations, and furthest-site Voronoi diagrams. It runs in 2-d, 3-d, 4-d, and higher dimensions. It implements the Quickhull algorithm for computing the convex hull. Qhull does not support constrained Delaunay triangulations, or mesh generation of non-convex objects, but the package does include some R functions that allow for this. Currently the package only gives access to Delaunay triangulation and convex hull computation.

This package provides functions to make useful (and pretty) plots for scientific plotting. Additional plotting features are added for base plotting, with particular emphasis on making attractive log axis plots.

This package provides an extendable, performant and multithreaded alt-string implementation backed by C++ vectors and strings.

This package provides a smooth mapping of multidimensional points into low-dimensional space defined by a self-organizing map. It is designed to work with FlowSOM and flow-cytometry use-cases.

This package provides routines for Maximum likelihood, Kalman filtering and smoothing, and Bayesian analysis of Normal linear State Space models, also known as Dynamic Linear Models.

This package provides functions and datasets for bootstrapping from the book "Bootstrap Methods and Their Application" by A.C. Davison and D.V. Hinkley (1997, CUP), originally written by Angelo Canty for S.

This package provides an implementation of interpreted string literals, inspired by Python's Literal String Interpolation (PEP-0498) and Docstrings (PEP-0257) and Julia's Triple-Quoted String Literals.

This package provides utilities to process, organize and explore protein structure, sequence and dynamics data. Features include the ability to read and write structure, sequence and dynamic trajectory data, perform sequence and structure database searches, data summaries, atom selection, alignment, superposition, rigid core identification, clustering, torsion analysis, distance matrix analysis, structure and sequence conservation analysis, normal mode analysis, principal component analysis of heterogeneous structure data, and correlation network analysis from normal mode and molecular dynamics data. In addition, various utility functions are provided to enable the statistical and graphical power of the R environment to work with biological sequence and structural data.

This package provides functions and datasets for the book "Modern Applied Statistics with S" (4th edition, 2002) by Venables and Ripley.

mlr3learners extends mlr3 and mlr3proba with interfaces to essential machine learning packages on CRAN. This includes, but is not limited to: (penalized) linear and logistic regression, linear and quadratic discriminant analysis, k-nearest neighbors, naive Bayes, support vector machines, and gradient boosting.

This package solves convex cone programs via operator splitting. It can solve: linear programs, second-order cone programs, semidefinite programs, exponential cone programs, and power cone programs, or problems with any combination of those cones. SCS uses AMD (a set of routines for permuting sparse matrices prior to factorization) and LDL (a sparse LDL factorization and solve package) from SuiteSparse.

With this package you can add in-app user authentication to Shiny, allowing you to secure publicly hosted apps and build dynamic user interfaces from user information.

This package provides a complete GCC cross toolchain for C/C++ development to be installed in user profiles. This includes GCC, as well as libc (headers and binariesl), and Binutils. GCC is the GNU Compiler Collection.

This package provides a complete GCC cross toolchain for C/C++ development to be installed in user profiles. This includes GCC, as well as libc (headers and binariesl), and Binutils. GCC is the GNU Compiler Collection.

This package provides a complete GCC cross toolchain for C/C++ development to be installed in user profiles. This includes GCC, as well as libc (headers and binariesl), and Binutils. GCC is the GNU Compiler Collection.

This package provides a complete GCC cross toolchain for C/C++ development to be installed in user profiles. This includes GCC, as well as libc (headers and binariesl), and Binutils. GCC is the GNU Compiler Collection.

This package provides a complete GCC cross toolchain for C/C++ development to be installed in user profiles. This includes GCC, as well as libc (headers and binariesl), and Binutils. GCC is the GNU Compiler Collection.

ISAAC (Indirection, Shift, Accumulate, Add, and Count) is a fast pseudo-random number generator. It is suitable for applications where a significant amount of random data needs to be produced quickly, such as solving using the Monte Carlo method or for games. The results are uniformly distributed, unbiased, and unpredictable unless you know the seed.

This package provides a Perl interface to the ISAAC pseudo random number generator.

Botan is a cryptography library, written in C++11, offering the tools necessary to implement a range of practical systems, such as TLS/DTLS, PKIX certificate handling, PKCS#11 and TPM hardware support, password hashing, and post-quantum crypto schemes. In addition to the C++, botan has a C89 API specifically designed to be easy to call from other languages. A Python binding using ctypes is included, and several other language bindings are available.

BLAKE2 is a cryptographic hash function faster than MD5, SHA-1, SHA-2, and SHA-3, yet is at least as secure as SHA-3.

This module provides implementations for a number of byte-oriented sources of random data.