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This package provides a small language extension for succinct conditional assignment using `?` and `:`, emulating the conditional ternary operator syntax using in C, Java, JavaScript and other languages.
This package provides functions to access, search and download spacetime earth observation data via SpatioTemporal Asset Catalog (STAC). This package supports the version 1.0.0 (and older) of the STAC specification (<https://github.com/radiantearth/stac-spec>). For further details see Simoes et al. (2021) <doi:10.1109/IGARSS47720.2021.9553518>.
This package provides tools for regression-based Boolean rule inference in artificial intelligence studies. The package fits ridge regression models on conjunction expansions and composes interpretable rule sets. Parallel execution is supported for multi-CPU environments.
This package provides functions to manipulate rational functions, including basic arithmetic operators, derivatives, and integrals with EXPLICIT forms.
The ability to plot raster graphics in PDF files can be useful when one needs multi-page documents, but the plots contain so many individual elements that (the usual) use of vector graphics results in inconveniently large file sizes. Internally, the package plots each individual page as a PNG, and then combines them in one PDF file.
This package provides environment modules functionality, which enables use of the Environment Modules system (<http://modules.sourceforge.net/>) from within the R environment. By default the user's login shell environment (ie. "bash -l") will be used to initialize the current session. The module function can also; load or unload specific software, list all the loaded software within the current session, and list all the applications available for loading from the module system. Lastly, the module function can remove all loaded software from the current session.
Fast and efficient computation of rolling and expanding eigenanalysis for time-series data. The rolleigen package decomposes the covariance matrix of the explanatory variables into eigenvalues and eigenvectors to perform principal component analysis (Pearson, 1901, <doi:10.1080/14786440109462720>; Hotelling, 1933, <doi:10.1037/h0071325>) and principal component regression (Massy, 1965, <doi:10.1080/01621459.1965.10480787>) over rolling and expanding windows. For each window, the eigenvalues and eigenvectors are computed from the covariance matrix and, optionally, ordered from largest to smallest to summarize the directions of greatest variation in the data. A subset of leading components is then used to fit a regression that mitigates collinearity in the explanatory variables. Use cases include dimensionality reduction, factor extraction, and regression on collinear explanatory variables. The package supports rolling and expanding windows, weights, and handling of missing values via the min_obs, complete_obs, and na_restore arguments. The implementation uses the online and offline algorithms from the roll package to compute rolling and expanding cross-products efficiently, with parallelism across columns and windows provided by RcppParallel'.
Interface for the Google Ads API'. Google Ads is an online advertising service that enables advertisers to display advertising to web users (see <https://developers.google.com/google-ads/> for more information).
Principal curves generalize the notion of a first principal component to the case in which it is a nonlinear smooth curve. This package provides a function pcop(X) to compute principal curves with the algorithm defined in Delicado (2001) <doi:10.1006/jmva.2000.1917> from a data matrix X.
This package performs Random Subspace Method (RSM) for high-dimensional linear regression to obtain variable importance measures. The final model is chosen based on validation set or Generalized Information Criterion.
Sets a significance level for Random Forest MDI (Mean Decrease in Impurity, Gini or sum of squares) variable importance scores, using an empirical Bayes approach. See Dunne et al. (2022) <doi:10.1101/2022.04.06.487300>.
This package provides a tidy, vectorized interface to the RxNorm / RxNav API for resolving drug names, RxCUIs, National Drug Codes (NDCs), and related drug concept metadata. The package supports workflows for mapping between drug names, RxCUIs, NDCs, ingredients, products, drug classes, and related concepts using data from the National Library of Medicine's RxNav services <https://lhncbc.nlm.nih.gov/RxNav/APIs/> and RxNorm <https://www.nlm.nih.gov/research/umls/rxnorm/>.
This package provides plotting helpers, table-formatting utilities, and report templates for econometrics, model development, and applied data analysis. Includes University of Cincinnati branded themes for ggplot2', modelsummary', flextable', rmarkdown', bookdown', and quarto'.
Unified interface for creating LLM and Agent objects, generating responses and performing batch inference based on a type-checked and validated S7 backend. Features reasoning, structured output, memory management, and tool use. Supports Ollama <https://docs.ollama.com/api>, OpenAI'-compatible <https://developers.openai.com/api/reference/overview>, and Anthropic'-compatible <https://platform.claude.com/docs/en/api/getting-started> endpoints.
Utilities for sparse signal recovery suitable for compressed sensing. L1, L2 and TV penalties, DFT basis matrix, simple sparse signal generator, mutual cumulative coherence between two matrices and examples, Lp complex norm, scaling back regression coefficients.
Exports an Rcpp interface for the Bessel functions in the Bessel package, which can then be called from the C++ code of other packages. For the original Fortran implementation of these functions see Amos (1995) <doi:10.1145/212066.212078>.
Packed bar charts are a variation of treemaps for visualizing skewed data. The concept was introduced by Xan Gregg at JMP'.
Designed to streamline data analysis and statistical testing, reducing the length of R scripts while generating well-formatted outputs in pdf', Microsoft Word', and Microsoft Excel formats. In essence, the package contains functions which are sophisticated wrappers around existing R functions that are called by using f_ (user f_riendly) prefix followed by the normal function name. This third version of the rfriend package focuses primarily on data exploration, including tools for creating summary tables, f_summary(), summary figures, f_scan(), outlier detection and removal, f_outlier() and f_remove_outliers(), performing data transformations, f_boxcox() in part based on MASS/boxcox and rcompanion', and f_bestNormalize() which wraps and extends functionality from the bestNormalize package. Furthermore, rfriend can automatically (or on request) generate visualizations such as boxplots, f_boxplot(), QQ-plots, f_qqnorm(), and histograms f_hist(). Additionally, the package includes several statistical test functions: f_aov(), f_chisq_test(), f_corplot(), f_kruskal_test(), f_lmer(), f_glm(), f_t_test(), f_wilcox_test(), for sequential testing and visualisation of the similar named stats functions. These functions, except for f_chisq_test(), support testing multiple response variables and predictors, while also handling assumption checks, data transformations, and post hoc tests. Post hoc results are automatically summarized in a table using the compact letter display (cld) format for easy interpretation. The package also provides a function to do model comparison, f_model_comparison(), and several utility functions to simplify common R tasks. For example, f_clear() clears the workspace and restarts R with a single command; f_setwd() sets the working directory to match the directory of the current script; f_theme() quickly changes RStudio themes; and f_factors() converts multiple columns of a data frame to factors, and much more. If you encounter any issues or have feature requests, please feel free to contact me via email.
Retime speech signals with a native Waveform Similarity Overlap-Add (WSOLA) implementation translated from the TSM toolbox by Driedger & Müller (2014) <https://www.audiolabs-erlangen.de/content/resources/MIR/TSMtoolbox/2014_DriedgerMueller_TSM-Toolbox_DAFX.pdf>. Design retimings and pitch (f0) transformations with tidy data and apply them via Praat interface. Produce spectrograms, spectra, and amplitude envelopes. Includes implementation of vocalic speech envelope analysis (fft_spectrum) technique and example data (mm1) from Tilsen, S., & Johnson, K. (2008) <doi:10.1121/1.2947626>.
Ports the Ripser <doi:10.48550/arXiv.1908.02518> and Cubical Ripser <doi:10.48550/arXiv.2005.12692> persistent homology calculation engines from C++. Can be used as a rapid calculation tool in topological data analysis pipelines.
This is a sudoku game package with a shiny application for playing .
General purpose R client for ERDDAPâ ¢ servers. Includes functions to search for datasets', get summary information on datasets', and fetch datasets', in either csv or netCDF format. ERDDAPâ ¢ information: <https://upwell.pfeg.noaa.gov/erddap/information.html>.
Higher-order spectra or polyspectra of time series, such as bispectrum and bicoherence, have been investigated in abundant literature and applied to problems of signal detection in a wide range of fields. This package aims to provide a simple API to estimate and analyze them. The current implementation is based on Brillinger and Irizarry (1998) <doi:10.1016/S0165-1684(97)00217-X> for estimating bispectrum or bicoherence, Lii and Helland (1981) <doi:10.1145/355958.355961> for cross-bispectrum, and Kim and Powers (1979) <doi:10.1109/TPS.1979.4317207> for cross-bicoherence.
Robust methods for estimating the parameters of multivariate Gaussian linear models.