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Tautulli (<http://tautulli.com>) is a monitoring application for Plex Media Servers (<https://www.plex.tv>) which collects a lot of data about media items and server usage such as play counts. This package interacts with the Tautulli API of any specified server to get said data into R. The Tautulli API documentation is available at <https://github.com/Tautulli/Tautulli/blob/master/API.md>.
Data frames with time information are subset and flagged with period information. Data frames with times are dealt as timeDF objects and periods are represented as periodDF objects.
Estimates time varying regression effects under Cox type models in survival data using classification and regression tree. The codes in this package were originally written in S-Plus for the paper "Survival Analysis with Time-Varying Regression Effects Using a Tree-Based Approach," by Xu, R. and Adak, S. (2002) <doi:10.1111/j.0006-341X.2002.00305.x>, Biometrics, 58: 305-315. Development of this package was supported by NIH grants AG053983 and AG057707, and by the UCSD Altman Translational Research Institute, NIH grant UL1TR001442. The content is solely the responsibility of the authors and does not necessarily represent the official views of the NIH. The example data are from the Honolulu Heart Program/Honolulu Asia Aging Study (HHP/HAAS).
Recursive partytioning of transformation models with corresponding random forest for conditional transformation models as described in Transformation Forests (Hothorn and Zeileis, 2021, <doi:10.1080/10618600.2021.1872581>) and Top-Down Transformation Choice (Hothorn, 2018, <DOI:10.1177/1471082X17748081>).
Efficient tabulation with Stata-like output. For each unique value of the variable, it shows the number of observations with that value, proportion of observations with that value, and cumulative proportion, in descending order of frequency. Accepts data.table, tibble, or data.frame as input. Efficient with big data: if you give it a data.table, tab() uses data.table syntax.
Create publication quality plots and tables for Item Response Theory and Classical Test theory based item analysis, exploratory and confirmatory factor analysis.
This package provides a simple approach for constructing dynamic materials modeling suggested by Prasad and Gegel (1984) <doi:10.1007/BF02664902>. It can easily generate various processing-maps based on this model as well. The calculation result in this package contains full materials constants, information about power dissipation efficiency factor, and rheological properties, can be exported completely also, through which further analysis and customized plots will be applicable as well.
Create highly customized tables with this simple and dependency-free package. Data frames can be converted to HTML', LaTeX', Markdown', Word', PNG', PDF', or Typst tables. The user interface is minimalist and easy to learn. The syntax is concise. HTML tables can be customized using the flexible Bootstrap framework, and LaTeX code with the tabularray package.
Calculate Characteristics of Quasi-Periodic Time Series, e.g. Estuarine Water Levels.
Construction of the Total Operating Characteristic (TOC) Curve and the Receiver (aka Relative) Operating Characteristic (ROC) Curve for spatial and non-spatial data. The TOC method is a modification of the ROC method which measures the ability of an index variable to diagnose either presence or absence of a characteristic. The diagnosis depends on whether the value of an index variable is above a threshold. Each threshold generates a two-by-two contingency table, which contains four entries: hits (H), misses (M), false alarms (FA), and correct rejections (CR). While ROC shows for each threshold only two ratios, H/(H + M) and FA/(FA + CR), TOC reveals the size of every entry in the contingency table for each threshold (Pontius Jr., R.G., Si, K. 2014. <doi:10.1080/13658816.2013.862623>).
Statistics students often have problems understanding the relation between a random variable's true scale and its z-values. To allow instructors to better better visualize histograms for these students, the package provides histograms with two horizontal axis containing z-values and the true scale of the variable. The function TeachHistDens() provides a density histogram with two axis. TeachHistCounts() and TeachHistRelFreq() are variations for count and relative frequency histograms, respectively. TeachConfInterv() and TeachHypTest() help instructors to visualize confidence levels and the results of hypothesis tests.
Third order response surface designs (M. Hemavathi, Shashi Shekhar, Eldho Varghese, Seema Jaggi, Bikas Sinha & Nripes Kumar Mandal (2022) <DOI:10.1080/03610926.2021.1944213>."Theoretical developments in response surface designs: an informative review and further thoughts") are classified into two types viz., designs which are suitable for sequential experimentation and designs for non-sequential experimentation (M. Hemavathi, Eldho Varghese, Shashi Shekhar & Seema Jaggi (2022)<DOI:10.1080/02664763.2020.1864817>." Sequential asymmetric third order rotatable designs (SATORDs)"). The sequential experimentation approach involves conducting the trials step by step whereas, in the non-sequential experimentation approach, the entire runs are executed in one go.This package contains functions named STORDs() and NSTORDs() for generating sequential/non-sequential TORDs given in Das, M. N., and V. L. Narasimham (1962). <DOI:10.1214/aoms/1177704374>. "Construction of rotatable designs through balanced incomplete block designs" along with the randomized layout. It also contains another function named Pred3.var() for generating the variance of predicted response as well as the moment matrix based on a third order response surface model.
Factor and autoregressive models for matrix and tensor valued time series. We provide functions for estimation, simulation and prediction. The models are discussed in Li et al (2021) <doi:10.48550/arXiv.2110.00928>, Chen et al (2020) <DOI:10.1080/01621459.2021.1912757>, Chen et al (2020) <DOI:10.1016/j.jeconom.2020.07.015>, and Xiao et al (2020) <doi:10.48550/arXiv.2006.02611>.
This package implements sentiment analysis using huggingface <https://huggingface.co> transformer zero-shot classification model pipelines for text and image data. The default text pipeline is Cross-Encoder's DistilRoBERTa <https://huggingface.co/cross-encoder/nli-distilroberta-base> and default image/video pipeline is Open AI's CLIP <https://huggingface.co/openai/clip-vit-base-patch32>. All other zero-shot classification model pipelines can be implemented using their model name from <https://huggingface.co/models?pipeline_tag=zero-shot-classification>.
Deconvolving thermoluminescence glow curves according to various kinetic models (first-order, second-order, general-order, and mixed-order) using a modified Levenberg-Marquardt algorithm (More, 1978) <DOI:10.1007/BFb0067700>. It provides the possibility of setting constraints or fixing any of parameters. It offers an interactive way to initialize parameters by clicking with a mouse on a plot at positions where peak maxima should be located. The optimal estimate is obtained by "trial-and-error". It also provides routines for simulating first-order, second-order, and general-order glow peaks.
Accurately estimates phase shifts by accounting for period changes and for the point in the circadian cycle at which the stimulus occurs. See Tackenberg et al. (2018) <doi:10.1177/0748730418768116>.
Mixed models for repeated measures (MMRM) are a popular choice for analyzing longitudinal continuous outcomes in randomized clinical trials and beyond; see for example Cnaan, Laird and Slasor (1997) <doi:10.1002/(SICI)1097-0258(19971030)16:20%3C2349::AID-SIM667%3E3.0.CO;2-E>. This package provides an interface for fitting MMRM within the tern <https://cran.r-project.org/package=tern> framework by Zhu et al. (2023) and tabulate results easily using rtables <https://cran.r-project.org/package=rtables> by Becker et al. (2023). It builds on mmrm <https://cran.r-project.org/package=mmrm> by Sabanés Bové et al. (2023) for the actual MMRM computations.
This package provides a collection of functions for Kronecker structured covariance estimation and testing under the array normal model. For estimation, maximum likelihood and Bayesian equivariant estimation procedures are implemented. For testing, a likelihood ratio testing procedure is available. This package also contains additional functions for manipulating and decomposing tensor data sets. This work was partially supported by NSF grant DMS-1505136. Details of the methods are described in Gerard and Hoff (2015) <doi:10.1016/j.jmva.2015.01.020> and Gerard and Hoff (2016) <doi:10.1016/j.laa.2016.04.033>.
Compute age-adjusted rates by direct and indirect methods and other epidemiological indicators in a tidy way, wrapping functions from the epitools package.
Allow to compute and visualise convective parameters commonly used in the operational prediction of severe convective storms. Core algorithm is based on a highly optimized C++ code linked into R via Rcpp'. Highly efficient engine allows to derive thermodynamic and kinematic parameters from large numerical datasets such as reanalyses or operational Numerical Weather Prediction models in a reasonable amount of time. Package has been developed since 2017 by research meteorologists specializing in severe thunderstorms. The most relevant methods used in the package based on the following publications Stipanuk (1973) <https://apps.dtic.mil/sti/pdfs/AD0769739.pdf>, McCann et al. (1994) <doi:10.1175/1520-0434(1994)009%3C0532:WNIFFM%3E2.0.CO;2>, Bunkers et al. (2000) <doi:10.1175/1520-0434(2000)015%3C0061:PSMUAN%3E2.0.CO;2>, Corfidi et al. (2003) <doi:10.1175/1520-0434(2003)018%3C0997:CPAMPF%3E2.0.CO;2>, Showalter (1953) <doi:10.1175/1520-0477-34.6.250>, Coffer et al. (2019) <doi:10.1175/WAF-D-19-0115.1>, Gropp and Davenport (2019) <doi:10.1175/WAF-D-17-0150.1>, Czernecki et al. (2019) <doi:10.1016/j.atmosres.2019.05.010>, Taszarek et al. (2020) <doi:10.1175/JCLI-D-20-0346.1>, Sherburn and Parker (2014) <doi:10.1175/WAF-D-13-00041.1>, Romanic et al. (2022) <doi:10.1016/j.wace.2022.100474>.
Create additional rows and columns on broom::tidy() output to allow for easier control on categorical parameter estimates.
Tri-hierarchical incomplete block design is defined as an arrangement of v treatments each replicated r times in a three system of blocks if, each block of the first system contains m_1 blocks of second system and each block of the second system contains m_2 blocks of the third system. Ignoring the first and second system of blocks, it leaves an incomplete block design with b_3 blocks of size k_3i units; ignoring first and third system of blocks, it leaves an incomplete block design with b_2 blocks each of size k_2i units and ignoring the second and third system of blocks, it leaves an incomplete block design with b_1 blocks each of size k_1 units. For dealing with experimental circumstances where there are three nested sources of variation, a tri-hierarchical incomplete block design can be adopted. Tri - hierarchical incomplete block designs can find application potential in obtaining mating-environmental designs for breeding trials. To know more about nested block designs one can refer Preece (1967) <doi:10.1093/biomet/54.3-4.479>. This package includes series1(), series2(), series3() and series4() functions. This package generates tri-hierarchical designs with six component designs under certain parameter restrictions.
TEMPoral TEnsor Decomposition (TEMPTED), is a dimension reduction method for multivariate longitudinal data with varying temporal sampling. It formats the data into a temporal tensor and decomposes it into a summation of low-dimensional components, each consisting of a subject loading vector, a feature loading vector, and a continuous temporal loading function. These loadings provide a low-dimensional representation of subjects or samples and can be used to identify features associated with clusters of subjects or samples. TEMPTED provides the flexibility of allowing subjects to have different temporal sampling, so time points do not need to be binned, and missing time points do not need to be imputed.
This package implements tic-tac-toe game to play on console, either with human or AI players. Various levels of AI players are trained through the Q-learning algorithm.