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This package provides tools to export R data as LaTeX and HTML tables.
This package allows you to install specified versions of R packages hosted on CRAN and provides functions to list available versions and the versions of currently installed packages.
This package provides visualizations for SHAP (SHapley Additive exPlanations) such as waterfall plots, force plots, various types of importance plots, dependence plots, and interaction plots. These plots act on a shapviz object created from a matrix of SHAP values and a corresponding feature dataset. Wrappers for the R packages xgboost, lightgbm, fastshap, shapr, h2o, treeshap, DALEX, and kernelshap are added for convenience. By separating visualization and computation, it is possible to display factor variables in graphs, even if the SHAP values are calculated by a model that requires numerical features. The plots are inspired by those provided by the shap package in Python, but there is no dependency on it.
Similarity Network Fusion takes multiple views of a network and fuses them together to construct an overall status matrix. The input to our algorithm can be feature vectors, pairwise distances, or pairwise similarities. The learned status matrix can then be used for retrieval, clustering, and classification.
This package provides procedures for fitting a principal curve to a data matrix in arbitrary dimensions.
This package provides a language extension to efficiently write functional programs in R. Syntax extensions include multi-part function definitions, pattern matching, guard statements, built-in (optional) type safety.
This is a package for visualizing data quality of partially accruing data.
This package provides alternative implementations of some base R functions, including sort, order, and match. The functions are simplified but can be faster or have other advantages.
This package provides three functions for dealing with dates: parse_iso_8601 recognizes and parses all valid ISO 8601 date and time formats, parse_date parses dates in unspecified formats, and format_iso_8601 formats a date in ISO 8601 format.
This package provides a collection of functions helpful in learning the basic tenets of Bayesian statistical inference. It contains functions for summarizing basic one and two parameter posterior distributions and predictive distributions. It contains MCMC algorithms for summarizing posterior distributions defined by the user. It also contains functions for regression models, hierarchical models, Bayesian tests, and illustrations of Gibbs sampling.
This package provides header library and R functions to solve minimum cost bipartite matching problem using Huhn-Munkres algorithm (Hungarian algorithm; <https://en.wikipedia.org/wiki/Hungarian_algorithm>; Kuhn (1955) <doi:10.1002/nav.3800020109>).
This package provides a recursively partitioned mixture model for Beta and Gaussian mixtures. This is a model-based clustering algorithm that returns a hierarchy of classes, similar to hierarchical clustering, but also similar to finite mixture models.
This package provides a collection of artificial and real-world machine learning benchmark problems, including, e.g., several data sets from the UCI repository.
This package provides statistical procedures for calculating population-mean cosinor, non-stationary cosinor, estimation of best-fitting period, tests of population rhythm differences and more.
This package provides an R wrapper to the Python natural language processing (NLP) library spaCy, from http://spacy.io.
This package provides basic classes and methods for Natural Language Processing.
This package provides functions and datasets for bootstrapping from the book "Bootstrap Methods and Their Application" by A.C. Davison and D.V. Hinkley (1997, CUP), originally written by Angelo Canty for S.
This package facilitates mapping by making natural earth map data from https://www.naturalearthdata.com/ more easily available to R users.
Users may want to align plots with associated information that requires axes to be exactly matched in subplots, e.g. hierarchical clustering with a heatmap. This package provides utilities to align associated subplots to a main plot at different sides (left, right, top and bottom) with axes exactly matched.
This package provides data sets and functions for Klein and Moeschberger (1997), "Survival Analysis, Techniques for Censored and Truncated Data", Springer.
This package provides tools for making the descriptive "Table 1" used in medical articles, a transition plot for showing changes between categories (also known as a Sankey diagram), flow charts by extending the grid package, a method for variable selection based on the SVD, Bezier lines with arrows complementing the ones in the grid package, and more.
This package provides various R programming tools for plotting data, including:
calculating and plotting locally smoothed summary function
enhanced versions of standard plots
manipulating colors
calculating and plotting two-dimensional data summaries
enhanced regression diagnostic plots
formula-enabled interface to
stats::lowessfunctiondisplaying textual data in plots
balloon plots
plotting "Venn" diagrams
displaying Open-Office style plots
plotting multiple data on same region, with separate axes
plotting means and confidence intervals
spacing points in an x-y plot so they don't overlap
This package provides a simple HTTP client, with tools for making HTTP requests, and mocking HTTP requests. The package is built on R6, and takes inspiration from Ruby's faraday gem.
This package aims to make it easy to use various types of fonts (TrueType, OpenType, Type 1, web fonts, etc.) in R graphs, and supports most output formats of R graphics including PNG, PDF and SVG. Text glyphs will be converted into polygons or raster images, hence after the plot has been created, it no longer relies on the font files. No external software such as Ghostscript is needed to use this package.